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BaseInfo

ncRNA ID novel_bra_miR533
Species Brassica rapa
Class miRNA
Genome position ChrA5:21322003-21322155 [+]
Reference genome Brapa_1.0
Source SRR1776877;SRR1776899
Length 24
Mature sequence(if miRNA) 130 - ACUGGAUUUUUAGUUGAGGGUUUU - 153
Stem-loop(if miRNA) --AAA                                     UGGUU          A              UAAA
     CUUCAACUAAAAAUCCAGUGAAAUAAACCCUCAACUU     CCGUUAACAU UGUUACCCUCCGUC    A
     |||||||||||||||||||||||||||||||||||||     |||||||||| ||||||||||||||    A
     GGAGUUGAUUUUUAGGUCACUUUAUUUGGGAGUUGAA     GGCAAUUGUA ACAAUGGGAGGCAG    A
UUUUG                                     UAUUU          A              UGCC
Stem-loop sequence AAACUUCAACUAAAAAUCCAGUGAAAUAAACCCUCAACUUUGGUUCCGUUAACAUAUGUUACCCUCCGUCUAAAAAACCGUGACGGAGGGUAACAAAUGUUAACGGUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU