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BaseInfo

ncRNA ID novel_bra_miR530
Species Brassica rapa
Class miRNA
Genome position ChrA5:2451065-2451257 [+]
Reference genome Brapa_1.0
Source SRR1776877
Length 24
Mature sequence(if miRNA) 1 - AGGGGGUUAACACAUAGAUUUUGA - 24
Stem-loop(if miRNA) --A            A      U        U                  U      U                  G      C   UG UG  GAU
   GGGGGUUAACAC UAGAUU UGAGAAAA UUCAAAAAAUAUGAUAAU UUGUUU AAUGCAUAGUUGUAUCAU AACUAA AUA  A  AU   C
   |||||||||||| |||||| |||||||| |||||||||||||||||| |||||| |||||||||||||||||| |||||| |||  |  ||
   UCCCCAAUUGUG AUCUAA AUUCUUUU AAGUUUUUUAUACUAUUA AAUAAA UUACGUAUCAACAUAGUA UUGAUU UAU  U  UA   A
ACA            C      C        U                  U      -                  A      U   GU UG  GAA
Stem-loop sequence AGGGGGUUAACACAUAGAUUUUGAGAAAAUUUCAAAAAAUAUGAUAAUUUUGUUUUAAUGCAUAGUUGUAUCAUGAACUAACAUAUGAUGAUGAUCAAAGAUGUUUGUAUUUUAGUUAAUGAUACAACUAUGCAUUAAAUAAUAUUAUCAUAUUUUUUGAAUUUUUCUUACAAUCUACGUGUUAACCCCUACA