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BaseInfo

ncRNA ID novel_bra_miR529
Species Brassica rapa
Class miRNA
Genome position ChrA5:11930761-11930912 [+]
Reference genome Brapa_1.0
Source SRR1776877;SRR1776889;SRR1776899;SRR1777714
Length 24
Mature sequence(if miRNA) 129 - AUAUUAUAGAGUGAACCAUUGGAG - 152
Stem-loop(if miRNA) --                     G       C           G            A    A           CAA
  CCAAUGGUUCACUCUAUAAUA AGUUACU UAUAAUAGAGU AAAUAUAGAGUA UCUU UUUUUUUACUC   A
  ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||||
  GGUUACCAAGUGAGAUAUUAU UCAAUGA AUAUUAUCUCA UUUAUAUCUCAU AGAA AAAAAAGUGAG   U
GA                     A       A           G            A    C           AUA
Stem-loop sequence CCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAAUCUUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUGACUCUAUUAUAAAGUAACUAUAUUAUAGAGUGAACCAUUGGAG