ncRNA ID | novel_bra_miR529 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:11930761-11930912 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776877;SRR1776889;SRR1776899;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 129 - AUAUUAUAGAGUGAACCAUUGGAG - 152 |
Stem-loop(if miRNA) |
--                     G       C           G            A    A           CAA   CCAAUGGUUCACUCUAUAAUA AGUUACU UAUAAUAGAGU AAAUAUAGAGUA UCUU UUUUUUUACUC   A   ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||||   GGUUACCAAGUGAGAUAUUAU UCAAUGA AUAUUAUCUCA UUUAUAUCUCAU AGAA AAAAAAGUGAG   U GA                     A       A           G            A    C           AUA |
Stem-loop sequence | CCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAAUCUUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUGACUCUAUUAUAAAGUAACUAUAUUAUAGAGUGAACCAUUGGAG |