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BaseInfo

ncRNA ID novel_bra_miR528
Species Brassica rapa
Class miRNA
Genome position ChrA5:8964065-8964231 [+]
Reference genome Brapa_1.0
Source SRR1776877
Length 24
Mature sequence(if miRNA) 144 - UCUAGGAUUUGGGUUUAGGGUAUA - 167
Stem-loop(if miRNA) --            U          CCUAAACC       UAU  C        U          CCUAAACCAAAACC     UCUUAA
  UAUCCUAAACCC AAUCCUAGAC        AAAACCC   AU CUAAACCC AAUCCUAGAC              CUAUA      C
  |||||||||||| ||||||||||        |||||||   || |||||||| ||||||||||              |||||      C
  AUGGGAUUUGGG UUAGGAUCUG        UUUUGGG   UG GAUUUGGG UUAGGGUUUG              GAUAU      C
AU            U          ------UA       -UU  C        U          -------AAUCUAC     CCCAAA
Stem-loop sequence UAUCCUAAACCCUAAUCCUAGACCCUAAACCAAAACCCUAUAUCCUAAACCCUAAUCCUAGACCCUAAACCAAAACCCUAUAUCUUAACCCAAACCCUAUAGCAUCUAAGUUUGGGAUUUGGGUUUAGCGUUUGGGUUUUAUGUCUAGGAUUUGGGUUUAGGGUAUA