ncRNA ID | novel_bra_miR528 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:8964065-8964231 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776877 |
Length | 24 |
Mature sequence(if miRNA) | 144 - UCUAGGAUUUGGGUUUAGGGUAUA - 167 |
Stem-loop(if miRNA) |
--            U          CCUAAACC       UAU  C        U          CCUAAACCAAAACC     UCUUAA   UAUCCUAAACCC AAUCCUAGAC        AAAACCC   AU CUAAACCC AAUCCUAGAC              CUAUA      C   |||||||||||| ||||||||||        |||||||   || |||||||| ||||||||||              |||||      C   AUGGGAUUUGGG UUAGGAUCUG        UUUUGGG   UG GAUUUGGG UUAGGGUUUG              GAUAU      C AU            U          ------UA       -UU  C        U          -------AAUCUAC     CCCAAA |
Stem-loop sequence | UAUCCUAAACCCUAAUCCUAGACCCUAAACCAAAACCCUAUAUCCUAAACCCUAAUCCUAGACCCUAAACCAAAACCCUAUAUCUUAACCCAAACCCUAUAGCAUCUAAGUUUGGGAUUUGGGUUUAGCGUUUGGGUUUUAUGUCUAGGAUUUGGGUUUAGGGUAUA |