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BaseInfo

ncRNA ID novel_bra_miR526
Species Brassica rapa
Class miRNA
Genome position ChrA4:13515204-13515380 [+]
Reference genome Brapa_1.0
Source SRR1776877;SRR1777714
Length 24
Mature sequence(if miRNA) 154 - AUCCAAGGGUUUAGGGUUUCGGAU - 177
Stem-loop(if miRNA) --  U                      C           -------    A     AAACUCUAGGAUUAAUCCUUAACUCUAAAUCAAAAU
  CC AAACCCUAAACCCUUGGAUAAA CCUAAACUCUA       GGAU AAUCC                                    C
  || |||||||||||||||||||||| |||||||||||       |||| |||||                                    A
  GG UUUGGGAUUUGGGAACCUAUUU GGAUUUGAGAU       UGUG AUUUU                                    C
UA  C                      A           UUAUUUU    -     AGGAUUUGAGAUUUGCGAACUUACAAAAUCACAUAU
Stem-loop sequence CCUAAACCCUAAACCCUUGGAUAAACCCUAAACUCUAGGAUAAAUCCAAACUCUAGGAUUAAUCCUUAACUCUAAAUCAAAAUCACUAUACACUAAAACAUUCAAGCGUUUAGAGUUUAGGAUUUUAGUGUUUUUAUUUAGAGUUUAGGAUUUAUCCAAGGGUUUAGGGUUUCGGAU