ncRNA ID | novel_bra_miR526 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:13515204-13515380 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776877;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 154 - AUCCAAGGGUUUAGGGUUUCGGAU - 177 |
Stem-loop(if miRNA) |
--  U                      C           -------    A     AAACUCUAGGAUUAAUCCUUAACUCUAAAUCAAAAU   CC AAACCCUAAACCCUUGGAUAAA CCUAAACUCUA       GGAU AAUCC                                    C   || |||||||||||||||||||||| |||||||||||       |||| |||||                                    A   GG UUUGGGAUUUGGGAACCUAUUU GGAUUUGAGAU       UGUG AUUUU                                    C UA  C                      A           UUAUUUU    -     AGGAUUUGAGAUUUGCGAACUUACAAAAUCACAUAU |
Stem-loop sequence | CCUAAACCCUAAACCCUUGGAUAAACCCUAAACUCUAGGAUAAAUCCAAACUCUAGGAUUAAUCCUUAACUCUAAAUCAAAAUCACUAUACACUAAAACAUUCAAGCGUUUAGAGUUUAGGAUUUUAGUGUUUUUAUUUAGAGUUUAGGAUUUAUCCAAGGGUUUAGGGUUUCGGAU |