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BaseInfo

ncRNA ID novel_bra_miR520
Species Brassica rapa
Class miRNA
Genome position ChrA3:22817288-22817350 [+]
Reference genome Brapa_1.0
Source SRR1776877
Length 24
Mature sequence(if miRNA) 1 - AGAGGAACUCUAUUAUAUAGGCAU - 24
Stem-loop(if miRNA) --     AAC             ----C    AU
  AGAGG   UCUAUUAUAUAGG     AUAC  U
  |||||   |||||||||||||     ||||
  UCUCU   AGAUAAUAUAUCU     UAUG  G
UA     -AA             ACUUU    AG
Stem-loop sequence AGAGGAACUCUAUUAUAUAGGCAUACAUUGGAGUAUUUUCAUCUAUAUAAUAGAAAUCUCUAU