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BaseInfo

ncRNA ID novel_bra_miR516
Species Brassica rapa
Class miRNA
Genome position ChrA2:14496042-14496194 [+]
Reference genome Brapa_1.0
Source SRR1776796;SRR1776877;SRR1776889;SRR1776899
Length 24
Mature sequence(if miRNA) 130 - ACUGGAUUUUUAGUUGAGGGUUUU - 153
Stem-loop(if miRNA) --                  AU                    UAGUUCA                       UAAA
  AACCCUCAACUAAAAAUC  GUGAAAUAAACCCUCAACUU       GUUAACAUAUGUUACCCUCCGUC    A
  ||||||||||||||||||  ||||||||||||||||||||       |||||||||||||||||||||||    A
  UUGGGAGUUGAUUUUUAG  CACUUUAUUUGGGAGUUGAA       CAAUUGUAUACAGUGGGAGGCAG    A
UU                  GU                    UAUUUGG                       UGCC
Stem-loop sequence AACCCUCAACUAAAAAUCAUGUGAAAUAAACCCUCAACUUUAGUUCAGUUAACAUAUGUUACCCUCCGUCUAAAAAACCGUGACGGAGGGUGACAUAUGUUAACGGUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU