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BaseInfo

ncRNA ID	novel_bra_miR506
Species	Brassica rapa
Class	miRNA
Genome position	ChrA9:34550942-34551037 [+]
Reference genome	Brapa_1.0
Source	SRR1776796
Length	24
Mature sequence(if miRNA)	1 - AUCGGAUUCGGUUCGGAUUUUCGG - 24
Stem-loop(if miRNA)	-AU   AU     -     U    GG     -G  UA  UG  CA   C    CGG  UCGGU UCGGA UUUC  GUUCG  UU  UU  CC  GCC U    |||  ||||| ||||| ||||  |||||  ||  ||  ||  ||| G    GUC  AGUUA AGCCU AGAG  CGAGC  GA  AA  GG  CGG G UUU   AU     C     U    -G     AG  GC  GU  -C   U
Stem-loop sequence	AUCGGAUUCGGUUCGGAUUUUCGGGUUCGGUUUAUUUGCCCAGCCCUGGUGGCCGGUGAACGAGGACGAGCGGAGAUUCCGACAUUGAUACUGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009140684.2	ncRNA:24   GGCU-UUUAGGCUUGGCUUAGGCUA   1   =|||-|||*|||||||||||||||* targets:30   UCGAGAAAACCGAACCGAAUCCGAA   54 Target Full Sequence	2.0	PREDICTED: Brassica rapa uncharacterized LOC103862954 (LOC103862954), mRNA	uncharacterized LOC103862954(LOC103862954)	coding protein	psRNATarget
XM_009122363.2	ncRNA:24   GGCUUUUAGGCUUGGCUUAGGCUA   1   =***||||||||||||||*||||* targets:1157   UACUAAAUCCGAACCGAACCCGAC   1180 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC103845491 (LOC103845491), mRNA	uncharacterized LOC103845491(LOC103845491)	coding protein	psRNATarget