ncRNA ID | ath-miRf10762-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - AGCUUCUGGUCAGAGGCUUG - NA |
Stem-loop(if miRNA) |
U   C   C              G       --CA     AUA       C  -       CC     AACC     U   A    CAU UUC AGCUUCUGGUCAGA GCUUGAC    UUUGU   UGCGCUU UC CCAUGUC  GUAUA    AAAAU CUC AGG  ||| ||| |||||||||||||| |||||||    |||||   ||||||| || |||||||  |||||    ||||| ||| ||U  GUA AAG UUGAGGACCAGUCU CGAACUG    GAACA   AUGCGAA AG GGUACAG  CAUAU    UUUUA GAG UCU G   A   -              A       ACAA     --A       -  C       -C     ---C     -   A   |
Stem-loop sequence | UCAUCUUCCAGCUUCUGGUCAGAGGCUUGACCAUUUGUAUAUGCGCUUCUCCCAUGUCCCGUAUAAACCAAAAUUCUCAAGGUUCUAGAGAUUUUCUAUACCGACAUGGCGAAAGCGUAAACAAGAACAGUCAAGCAUCUGACCAGGAGUUGAAAAUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT002137.1 |
|
2.5 | Arabidopsis thaliana unknown protein (At1g73100) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
AF344446.2 |
|
2.5 | Arabidopsis thaliana SUVH3 (SUVH3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
AY099620.1 |
|
2.5 | Arabidopsis thaliana unknown protein (At1g73100) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_105968.3 |
|
2.5 | Arabidopsis thaliana histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein (SUVH3), mRNA | histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein(SUVH3) | coding protein | psRNATarget |