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BaseInfo

ncRNA ID ath-miRf10762-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGCUUCUGGUCAGAGGCUUG - NA
Stem-loop(if miRNA) U   C   C              G       --CA     AUA       C  -       CC     AACC     U   A  
 CAU UUC AGCUUCUGGUCAGA GCUUGAC    UUUGU   UGCGCUU UC CCAUGUC  GUAUA    AAAAU CUC AGG
 ||| ||| |||||||||||||| |||||||    |||||   ||||||| || |||||||  |||||    ||||| ||| ||U
 GUA AAG UUGAGGACCAGUCU CGAACUG    GAACA   AUGCGAA AG GGUACAG  CAUAU    UUUUA GAG UCU
G   A   -              A       ACAA     --A       -  C       -C     ---C     -   A  
Stem-loop sequence UCAUCUUCCAGCUUCUGGUCAGAGGCUUGACCAUUUGUAUAUGCGCUUCUCCCAUGUCCCGUAUAAACCAAAAUUCUCAAGGUUCUAGAGAUUUUCUAUACCGACAUGGCGAAAGCGUAAACAAGAACAGUCAAGCAUCUGACCAGGAGUUGAAAAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT002137.1
ncRNA:20   GUUCGGAGACUGGUCUUCGA   1
  |||||*|||||=||||||||
targets:856   CAAGCAUCUGAUCAGAAGCU   875

2.5 Arabidopsis thaliana unknown protein (At1g73100) mRNA, complete cds NA coding protein psRNATarget
AF344446.2
ncRNA:20   GUUCGGAGACUGGUCUUCGA   1
  |||||*|||||=||||||||
targets:1005   CAAGCAUCUGAUCAGAAGCU   1024

2.5 Arabidopsis thaliana SUVH3 (SUVH3) mRNA, complete cds NA coding protein psRNATarget
AY099620.1
ncRNA:20   GUUCGGAGACUGGUCUUCGA   1
  |||||*|||||=||||||||
targets:1027   CAAGCAUCUGAUCAGAAGCU   1046

2.5 Arabidopsis thaliana unknown protein (At1g73100) mRNA, complete cds NA coding protein psRNATarget
NM_105968.3
ncRNA:20   GUUCGGAGACUGGUCUUCGA   1
  |||||*|||||=||||||||
targets:1067   CAAGCAUCUGAUCAGAAGCU   1086

2.5 Arabidopsis thaliana histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein (SUVH3), mRNA histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein(SUVH3) coding protein psRNATarget