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BaseInfo

ncRNA ID novel_bra_miR504
Species Brassica rapa
Class miRNA
Genome position ChrA1:15830870-15831057 [+]
Reference genome Brapa_1.0
Source SRR1776796
Length 23
Mature sequence(if miRNA) 166 - AUAUUAUUUGACAAUACUUUGUU - 188
Stem-loop(if miRNA) --    A           U                       A       A                      --            ---U    AA
  UAAA UAUUGUCAAGU AUAUUAUGUUUUUAAAAUAAAAA AUAAAAA UAAAUAAAAAUAGUAGUAGUUA  AAAAAAAGAUUU    UGUA  A
  |||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||    ||||
  GUUU AUAACAGUUUA UAUAAUACAGAAAUUUUAUUUUU UAUUUUU AUUUAUUUUUAUUAUUAUCAAU  UUUUUUUUUAAA    ACAU  A
UU    C           U                       C       -                      GU            UUCU    AG
Stem-loop sequence UAAAAUAUUGUCAAGUUAUAUUAUGUUUUUAAAAUAAAAAAAUAAAAAAUAAAUAAAAAUAGUAGUAGUUAAAAAAAAGAUUUUUGUAAAAAGAUACAUCUUAAAUUUUUUUUUUGUAACUAUUAUUAUUUUUAUUUAUUUUUAUCUUUUUAUUUUAAAGACAUAAUAUUAUUUGACAAUACUUUGUU