ncRNA ID | novel_bra_miR504 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:15830870-15831057 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776796 |
Length | 23 |
Mature sequence(if miRNA) | 166 - AUAUUAUUUGACAAUACUUUGUU - 188 |
Stem-loop(if miRNA) |
--    A           U                       A       A                      --            ---U    AA   UAAA UAUUGUCAAGU AUAUUAUGUUUUUAAAAUAAAAA AUAAAAA UAAAUAAAAAUAGUAGUAGUUA  AAAAAAAGAUUU    UGUA  A   |||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||    ||||   GUUU AUAACAGUUUA UAUAAUACAGAAAUUUUAUUUUU UAUUUUU AUUUAUUUUUAUUAUUAUCAAU  UUUUUUUUUAAA    ACAU  A UU    C           U                       C       -                      GU            UUCU    AG |
Stem-loop sequence | UAAAAUAUUGUCAAGUUAUAUUAUGUUUUUAAAAUAAAAAAAUAAAAAAUAAAUAAAAAUAGUAGUAGUUAAAAAAAAGAUUUUUGUAAAAAGAUACAUCUUAAAUUUUUUUUUUGUAACUAUUAUUAUUUUUAUUUAUUUUUAUCUUUUUAUUUUAAAGACAUAAUAUUAUUUGACAAUACUUUGUU |