Search result

BaseInfo

ncRNA ID novel_bra_miR497
Species Brassica rapa
Class miRNA
Genome position ChrA9:8774037-8774115 [-]
Reference genome Brapa_1.0
Source SRR1776796
Length 21
Mature sequence(if miRNA) 59 - ACUUAAUUUCAGAAACUUUAA - 79
Stem-loop(if miRNA) --                                     
  ACUUAAUUUCAGAAACUUUAAAAACAGUUAUGUAGAGA
  |||||||||||||||||||||||||||||||||||||C
  UGAAUUAAAGUCUUUGAAAUUUUUGUCAAUACAUCUCU
UU                                     
Stem-loop sequence ACUUAAUUUCAGAAACUUUAAAAACAGUUAUGUAGAGACUCUCUACAUAACUGUUUUUAAAGUUUCUGAAAUUAAGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009139266.2
ncRNA:21   AAUUUCAAAGACUUUAAUUCA   1
  |*|||*||||||||||||||*
targets:106   UCAAACUUUCUGAAAUUAAGA   126

2.0 PREDICTED: Brassica rapa AT-hook motif nuclear-localized protein 3-like (LOC103861546), mRNA AT-hook motif nuclear-localized protein 3-like(LOC103861546) coding protein psRNATarget