| ncRNA ID | novel_bra_miR496 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA9:13661488-13661614 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1776796;SRR1776877;SRR1776889 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - GGAGUGGAAUGGGAGAUGCUC - 21 |
| Stem-loop(if miRNA) |
-- A C A UA U A A CU UU U GCAUCUUC AU CCACUCC UAUUUU UUUAAAAU GAGAAAAU GAGU AUG U A U |||||||| || ||||||| |||||| |||||||| |||||||| |||| ||| | | U CGUAGAGG UA GGUGAGG AUAAAA AAAUUUUA UUUUUUUA CUCG UAC G U U CU G A A UG U C G UU UU U |
| Stem-loop sequence | GCAUCUUCAAUCCCACUCCAUAUUUUUAUUUAAAAUUGAGAAAAUAGAGUAAUGCUUUUAUUUUUUUUGUUCAUGGCUCCAUUUUUUUUAUUUUAAAGUAAAAUAAGGAGUGGAAUGGGAGAUGCUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009135819.2 |
|
2.0 | PREDICTED: Brassica rapa probable UDP-arabinopyranose mutase 4 (LOC103858454), transcript variant X2, mRNA | probable UDP-arabinopyranose mutase 4(LOC103858454) | coding protein | psRNATarget | |||||||||
| XM_009135818.2 |
|
2.0 | PREDICTED: Brassica rapa probable UDP-arabinopyranose mutase 4 (LOC103858454), transcript variant X1, mRNA | probable UDP-arabinopyranose mutase 4(LOC103858454) | coding protein | psRNATarget |