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BaseInfo

ncRNA ID	novel_bra_miR488
Species	Brassica rapa
Class	miRNA
Genome position	ChrA2:6983723-6983856 [-]
Reference genome	Brapa_1.0
Source	SRR1161445
Length	21
Mature sequence(if miRNA)	1 - UCAGGUUUUUGGUAUAGUUCC - 21
Stem-loop(if miRNA)	--             U       UG               GUA   U      UG          GG   AACUAUACUAAAA CUUGAAC  AACUAACCAAAUUUC   CCG AAUAAC  AACUUUUUUU  U   ||||||||||||| |||||||  |||||||||||||||   ||| ||||||  ||||||||||   UUGAUAUGGUUUU GGACUUG  UUGAUUGGUUUAAAG   GGC UUAUUG  UUGAAAAAAA  C CC             U       GU               AUG   U      GU          GU
Stem-loop sequence	AACUAUACUAAAAUCUUGAACUGAACUAACCAAAUUUCGUACCGUAAUAACUGAACUUUUUUUGGUCUGAAAAAAAGUUUGGUUAUUUCGGGUAGAAAUUUGGUUAGUUUGGUUCAGGUUUUUGGUAUAGUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009114810.2	ncRNA:21   CCUUGAUAUGGUUUUUGGACU   1   **|||||||||||||*||||* targets:427   CCAACUAUACCAAAACCCUGC   447 Target Full Sequence	2.5	PREDICTED: Brassica rapa putative F-box protein At1g47790 (LOC103838375), mRNA	putative F-box protein At1g47790(LOC103838375)	coding protein	psRNATarget