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BaseInfo

ncRNA ID novel_bra_miR487
Species Brassica rapa
Class miRNA
Genome position ChrA8:21191300-21191476 [+]
Reference genome Brapa_1.0
Source SRR1776796;SRR1776899
Length 24
Mature sequence(if miRNA) 154 - AGUAGAAUUUUUAUAGAGUUGGUU - 177
Stem-loop(if miRNA) --A             -     ------------AUGUA    -        G  ---AAG          - U   UU   GUUU    --UU     AA
   UAACUCUAUAAAG UUCUA                 UGAA AAACAUGU AU      CGGUGUAUAU C GCG  CUG    CCAU    GUAUU  A
   ||||||||||||| |||||                 |||| |||||||| ||      |||||||||| | |||  |||    ||||    |||||
   GUUGAGAUAUUUU AAGAU                 AUUU UUUGUAUA UA      GUCACGUAUA G UGU  GAU    GGUA    CAUGA  C
UUG             U     GAGGGUGAUUGGGGGGG    C        G  AGUUUA          A U   -U   ----    UUAU     AU
Stem-loop sequence AUAACUCUAUAAAGUUCUAAUGUAUGAAAAACAUGUGAUAAGCGGUGUAUAUCUGCGUUCUGGUUUCCAUUUGUAUUAAACUAAGUACUAUUAUGGUAGUUGUUGAAUAUGCACUGAUUUGAAUGAUAUGUUUCUUUAGGGGGGGUUAGUGGGAGUAGAAUUUUUAUAGAGUUGGUU