ncRNA ID | novel_bra_miR483 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:1497891-1497943 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776796 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CGGAACACUUCUCGGAAGACUUA - 23 |
Stem-loop(if miRNA) |
--        -     AC        U   AGUCUUCC AGAAG  UUCUGGGA G   |||||||| |||||  ||||||||   UCAGAAGG UCUUC  AAGGCCUU U AU        C     AC        C |
Stem-loop sequence | AGUCUUCCAGAAGACUUCUGGGAUGUCUUCCGGAACACUUCUCGGAAGACUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018653387.1 |
|
2.5 | PREDICTED: Brassica rapa cytochrome P450 81F1-like (LOC103833873), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_009152198.2 |
|
3.0 | PREDICTED: Brassica rapa beta-galactosidase 10 (LOC103873800), mRNA | beta-galactosidase 10(LOC103873800) | coding protein | psRNATarget |