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BaseInfo

ncRNA ID novel_bra_miR481
Species Brassica rapa
Class miRNA
Genome position ChrA7:8481641-8481751 [-]
Reference genome Brapa_1.0
Source SRR1776796
Length 24
Mature sequence(if miRNA) 1 - UAUGUAGCGACCGAGCGGGACGAU - 24
Stem-loop(if miRNA) --                               CUC  GCCAAA  C        A
  CGUCCCGCUCGGUCGCUACGUAGCGACCGAG   GA      GC CGGUUGCU C
  |||||||||||||||||||||||||||||||   ||      || ||||||||
  GCAGGGCGAGCCAGCGAUGUAUCGCUGGCUC   CU      CG GCCAACGA G
UA                               ACC  -AACUG  A        U
Stem-loop sequence CGUCCCGCUCGGUCGCUACGUAGCGACCGAGCUCGAGCCAAAGCCCGGUUGCUACGUAGCAACCGAGCGUCAAUCCCACUCGGUCGCUAUGUAGCGACCGAGCGGGACGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009126102.1
ncRNA:24   UAGCAGGGCGAGCCAGCGAUGUAU   1
  =|||||||||||||||||||=||=
targets:537   GUCGUCCCGCUCGGUCGCUAUAUG   560

2.5 PREDICTED: Brassica rapa uncharacterized LOC103849316 (LOC103849316), mRNA uncharacterized LOC103849316(LOC103849316) coding protein psRNATarget