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BaseInfo

ncRNA ID novel_bra_miR479
Species Brassica rapa
Class miRNA
Genome position ChrA6:13322516-13322624 [-]
Reference genome Brapa_1.0
Source SRR1776796
Length 23
Mature sequence(if miRNA) 1 - UACGUAGCGACCGAGCUUGGCUU - 23
Stem-loop(if miRNA) --  U        A               C  ACC         ---C      G  A
  GC CGAGCUCG UCGCUACGUAGCGAC GA   GUACGCGUG    UCAGUC CU C
  || |||||||| ||||||||||||||| ||   |||||||||    |||||| ||
  CG GUUCGAGC AGCGAUGCAUCGCUG CU   CGUGCGCAU    AGUCAG GA G
UU  -        C               A  ---         ACCU      G  U
Stem-loop sequence GCUCGAGCUCGAUCGCUACGUAGCGACCGAACCGUACGCGUGCUCAGUCGCUACGUAGGGACUGAUCCAUACGCGUGCUCAGUCGCUACGUAGCGACCGAGCUUGGCUU