ncRNA ID | novel_bra_miR479 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:13322516-13322624 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776796 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UACGUAGCGACCGAGCUUGGCUU - 23 |
Stem-loop(if miRNA) |
--  U        A               C  ACC         ---C      G  A   GC CGAGCUCG UCGCUACGUAGCGAC GA   GUACGCGUG    UCAGUC CU C   || |||||||| ||||||||||||||| ||   |||||||||    |||||| ||   CG GUUCGAGC AGCGAUGCAUCGCUG CU   CGUGCGCAU    AGUCAG GA G UU  -        C               A  ---         ACCU      G  U |
Stem-loop sequence | GCUCGAGCUCGAUCGCUACGUAGCGACCGAACCGUACGCGUGCUCAGUCGCUACGUAGGGACUGAUCCAUACGCGUGCUCAGUCGCUACGUAGCGACCGAGCUUGGCUU |