ncRNA ID | novel_bra_miR470 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:4161543-4161698 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776796 |
Length | 24 |
Mature sequence(if miRNA) | 133 - AUUAUAUAGUGAACCAUUGGAGCA - 156 |
Stem-loop(if miRNA) |
--       A       C         A               C              A  CUA           CAA   UUCUAAU GUUCACU UAUAAUAGA UUACUCUAUAAUAGA UGAAAUAUAGAGUA UC   UUUUUUUACUC   A   ||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||||| ||   |||||||||||   GAGGUUA CAAGUGA AUAUUAUCU AAUGAGAUAUUAUCU ACUUUAUAUCUCAU AG   AAAAAAGUGAG   U AC       C       U         C               C              A  AAC           AUA |
Stem-loop sequence | UUCUAAUAGUUCACUCUAUAAUAGAAUUACUCUAUAAUAGACUGAAAUAUAGAGUAAUCCUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAUAGUGAACCAUUGGAGCA |