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BaseInfo

ncRNA ID novel_bra_miR470
Species Brassica rapa
Class miRNA
Genome position ChrA10:4161543-4161698 [+]
Reference genome Brapa_1.0
Source SRR1776796
Length 24
Mature sequence(if miRNA) 133 - AUUAUAUAGUGAACCAUUGGAGCA - 156
Stem-loop(if miRNA) --       A       C         A               C              A  CUA           CAA
  UUCUAAU GUUCACU UAUAAUAGA UUACUCUAUAAUAGA UGAAAUAUAGAGUA UC   UUUUUUUACUC   A
  ||||||| ||||||| ||||||||| ||||||||||||||| |||||||||||||| ||   |||||||||||
  GAGGUUA CAAGUGA AUAUUAUCU AAUGAGAUAUUAUCU ACUUUAUAUCUCAU AG   AAAAAAGUGAG   U
AC       C       U         C               C              A  AAC           AUA
Stem-loop sequence UUCUAAUAGUUCACUCUAUAAUAGAAUUACUCUAUAAUAGACUGAAAUAUAGAGUAAUCCUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAUAGUGAACCAUUGGAGCA