ncRNA ID | novel_bra_miR468 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:14319771-14319881 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776796 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUGUAGCGACCGAGCGGGACGAU - 24 |
Stem-loop(if miRNA) |
--                               CUC  GCCAAA  C        A   CGUCCCGCUCGGUCGCUACGUAGCGACCGAG   GA      GC CGGUUGCU C   |||||||||||||||||||||||||||||||   ||      || ||||||||   GCAGGGCGAGCCAGCGAUGUAUCGCUGGCUC   CU      CG GCCAACGA G UA                               ACC  -AACUG  A        U |
Stem-loop sequence | CGUCCCGCUCGGUCGCUACGUAGCGACCGAGCUCGAGCCAAAGCCCGGUUGCUACGUAGCAACCGAGCGUCAAUCCCACUCGGUCGCUAUGUAGCGACCGAGCGGGACGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009126102.1 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103849316 (LOC103849316), mRNA | uncharacterized LOC103849316(LOC103849316) | coding protein | psRNATarget |