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BaseInfo

ncRNA ID novel_bra_miR465
Species Brassica rapa
Class miRNA
Genome position ChrA4:4127093-4127293 [+]
Reference genome Brapa_1.0
Source SRR1776796;SRR1776877;SRR1776880;SRR1776889;SRR1776899
Length 24
Mature sequence(if miRNA) 1 - GUGGACUGAAUAGUGAUAGACGCC - 24
Stem-loop(if miRNA) -- U GA UG           -   -   -CA   UGACCAAAGAUUGGAUUAAUAUCCAUAGACCACUUUUUGGAGCUUUUUUGGAGACUCCUAUUUUGGA
  G G  C  AAUAGUGAUAG ACG CCA   CCA                                                                   G
  | |  |  ||||||||||| ||| |||   |||
  C C  G  UUGUUAUUGUU UGC GGU   AGC                                                                   A
AG C AG GU           A   U   AUU   AAAAGAAGUUUUAAGGGUAUUAUCAAGGUAGGGGAGCCUUGUCAAGAGUUUUAAGAGAGAAAUAAUG
Stem-loop sequence GUGGACUGAAUAGUGAUAGACGCCACACCAUGACCAAAGAUUGGAUUAAUAUCCAUAGACCACUUUUUGGAGCUUUUUUGGAGACUCCUAUUUUGGAGAGUAAUAAAGAGAGAAUUUUGAGAACUGUUCCGAGGGGAUGGAACUAUUAUGGGAAUUUUGAAGAAAACGAUUAUGGUCGUAUUGUUAUUGUUUGGGACCCGA