ncRNA ID | novel_bra_miR465 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:4127093-4127293 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776796;SRR1776877;SRR1776880;SRR1776889;SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGGACUGAAUAGUGAUAGACGCC - 24 |
Stem-loop(if miRNA) |
-- U GA UG           -   -   -CA   UGACCAAAGAUUGGAUUAAUAUCCAUAGACCACUUUUUGGAGCUUUUUUGGAGACUCCUAUUUUGGA   G G  C  AAUAGUGAUAG ACG CCA   CCA                                                                   G   | |  |  ||||||||||| ||| |||   |||   C C  G  UUGUUAUUGUU UGC GGU   AGC                                                                   A AG C AG GU           A   U   AUU   AAAAGAAGUUUUAAGGGUAUUAUCAAGGUAGGGGAGCCUUGUCAAGAGUUUUAAGAGAGAAAUAAUG |
Stem-loop sequence | GUGGACUGAAUAGUGAUAGACGCCACACCAUGACCAAAGAUUGGAUUAAUAUCCAUAGACCACUUUUUGGAGCUUUUUUGGAGACUCCUAUUUUGGAGAGUAAUAAAGAGAGAAUUUUGAGAACUGUUCCGAGGGGAUGGAACUAUUAUGGGAAUUUUGAAGAAAACGAUUAUGGUCGUAUUGUUAUUGUUUGGGACCCGA |