ncRNA ID | novel_bra_miR463 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:7971884-7971941 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776796 |
Length | 24 |
Mature sequence(if miRNA) | 35 - UCGGAUUACUUUGAAUAUUUCGGA - 58 |
Stem-loop(if miRNA) |
--      U    UG  UAU        A   UCGGAU ACUU  AA   UUCGGAUA A   |||||| ||||  ||   ||||||||   GGCUUG UGGA  UU   AGGUCUAU A UA      U    GU  CAU        C |
Stem-loop sequence | UCGGAUUACUUUGAAUAUUUCGGAUAAAACUAUCUGGAUACUUUGAGGUUGUUCGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009138766.2 |
|
2.5 | PREDICTED: Brassica rapa vacuolar protein sorting-associated protein 54, chloroplastic-like (LOC103861057), mRNA | vacuolar protein sorting-associated protein 54, chloroplastic-like(LOC103861057) | coding protein | psRNATarget |