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BaseInfo

ncRNA ID novel_bra_miR462
Species Brassica rapa
Class miRNA
Genome position ChrA4:16969057-16969171 [+]
Reference genome Brapa_1.0
Source SRR1776796;SRR1776877;SRR1776880;SRR1777714;SRR2912891;SRR2912894;SRR1125021
Length 21
Mature sequence(if miRNA) 95 - AUCAUGCUAUCCCUUUCGAUU - 115
Stem-loop(if miRNA) --  C        C    U     U  GU    UG  UUCUCCUUAU      -  UAA
  UC AAAGGGAU GCAU GAUCC AA  CGAG  AA          UAUUUU CU   U
  || |||||||| |||| ||||| ||  ||||  ||          |||||| ||
  AG UUUCCCUA CGUA CUAGG UU  GUUC  UU          AUAAAA GG   U
UU  C        U    -     U  UG    GU  -UAAAACCCU      C  UUA
Stem-loop sequence UCCAAAGGGAUCGCAUUGAUCCUAAGUCGAGUGAAUUCUCCUUAUUAUUUUCUUAAUUAUUGGCAAAAUAUCCCAAAAUUUUGCUUGGUUUUGGAUCAUGCUAUCCCUUUCGAUU