ncRNA ID | novel_bra_miR462 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:16969057-16969171 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776796;SRR1776877;SRR1776880;SRR1777714;SRR2912891;SRR2912894;SRR1125021 |
Length | 21 |
Mature sequence(if miRNA) | 95 - AUCAUGCUAUCCCUUUCGAUU - 115 |
Stem-loop(if miRNA) |
--  C        C    U     U  GU    UG  UUCUCCUUAU      -  UAA   UC AAAGGGAU GCAU GAUCC AA  CGAG  AA          UAUUUU CU   U   || |||||||| |||| ||||| ||  ||||  ||          |||||| ||   AG UUUCCCUA CGUA CUAGG UU  GUUC  UU          AUAAAA GG   U UU  C        U    -     U  UG    GU  -UAAAACCCU      C  UUA |
Stem-loop sequence | UCCAAAGGGAUCGCAUUGAUCCUAAGUCGAGUGAAUUCUCCUUAUUAUUUUCUUAAUUAUUGGCAAAAUAUCCCAAAAUUUUGCUUGGUUUUGGAUCAUGCUAUCCCUUUCGAUU |