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BaseInfo

ncRNA ID novel_bra_miR461
Species Brassica rapa
Class miRNA
Genome position ChrA4:6244697-6244853 [+]
Reference genome Brapa_1.0
Source SRR1776796
Length 24
Mature sequence(if miRNA) 1 - AUAUAUAGACGACUUACAAUUCAG - 24
Stem-loop(if miRNA) --    A                       C                    A      C       ----A    -    G
  AUAU UAGACGACUUACAAUUCAGUCGU CGUCCGACGACUUACAUGUA GUCGUC AGGAUUU     CGAG UUUU A
  |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||     |||| ||||
  UAUG GUUUGUUGAAUGUUAAGUCAGCA GCGGGCUGCUGAAUGUACAU CAGCAG UUCUAAA     GCUC AAGA C
AA    G                       A                    G      A       AUAAG    U    C
Stem-loop sequence AUAUAUAGACGACUUACAAUUCAGUCGUCCGUCCGACGACUUACAUGUAAGUCGUCCAGGAUUUACGAGUUUUGACCAGAAUCUCGGAAUAAAAUCUUAGACGACGUACAUGUAAGUCGUCGGGCGAACGACUGAAUUGUAAGUUGUUUGGGUAUAA