ncRNA ID | novel_bra_miR461 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:6244697-6244853 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776796 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUAUAGACGACUUACAAUUCAG - 24 |
Stem-loop(if miRNA) |
--    A                       C                    A      C       ----A    -    G   AUAU UAGACGACUUACAAUUCAGUCGU CGUCCGACGACUUACAUGUA GUCGUC AGGAUUU     CGAG UUUU A   |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||     |||| ||||   UAUG GUUUGUUGAAUGUUAAGUCAGCA GCGGGCUGCUGAAUGUACAU CAGCAG UUCUAAA     GCUC AAGA C AA    G                       A                    G      A       AUAAG    U    C |
Stem-loop sequence | AUAUAUAGACGACUUACAAUUCAGUCGUCCGUCCGACGACUUACAUGUAAGUCGUCCAGGAUUUACGAGUUUUGACCAGAAUCUCGGAAUAAAAUCUUAGACGACGUACAUGUAAGUCGUCGGGCGAACGACUGAAUUGUAAGUUGUUUGGGUAUAA |