ncRNA ID | novel_bra_miR456 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:22817178-22817311 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776796;SRR1776889;SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 111 - AGAGGAACUCUAUUAUAUAGGCAU - 134 |
Stem-loop(if miRNA) |
--    C                     A                 AUAUGU     -CUAC     A   GCCU UAUAAUAGAGUUUCUCUAUUU UAGAGGAAAAUAUAGAG      UAUUU     CUCUA A   |||| ||||||||||||||||||||| |||||||||||||||||      |||||     |||||   CGGA AUAUUAUCUCAAGGAGAUAAA AUUUCUUUUUAUAUCUC      AUGAA     GAGAU U UA    U                     -                 CUUUUC     AAACA     A |
Stem-loop sequence | GCCUCUAUAAUAGAGUUUCUCUAUUUAUAGAGGAAAAUAUAGAGAUAUGUUAUUUCUACCUCUAAAUAUAGAGACAAAAAGUACUUUUCCUCUAUAUUUUUCUUUAAAAUAGAGGAACUCUAUUAUAUAGGCAU |