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BaseInfo

ncRNA ID novel_bra_miR456
Species Brassica rapa
Class miRNA
Genome position ChrA3:22817178-22817311 [+]
Reference genome Brapa_1.0
Source SRR1776796;SRR1776889;SRR1776899
Length 24
Mature sequence(if miRNA) 111 - AGAGGAACUCUAUUAUAUAGGCAU - 134
Stem-loop(if miRNA) --    C                     A                 AUAUGU     -CUAC     A
  GCCU UAUAAUAGAGUUUCUCUAUUU UAGAGGAAAAUAUAGAG      UAUUU     CUCUA A
  |||| ||||||||||||||||||||| |||||||||||||||||      |||||     |||||
  CGGA AUAUUAUCUCAAGGAGAUAAA AUUUCUUUUUAUAUCUC      AUGAA     GAGAU U
UA    U                     -                 CUUUUC     AAACA     A
Stem-loop sequence GCCUCUAUAAUAGAGUUUCUCUAUUUAUAGAGGAAAAUAUAGAGAUAUGUUAUUUCUACCUCUAAAUAUAGAGACAAAAAGUACUUUUCCUCUAUAUUUUUCUUUAAAAUAGAGGAACUCUAUUAUAUAGGCAU