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BaseInfo

ncRNA ID novel_bra_miR453
Species Brassica rapa
Class miRNA
Genome position ChrA2:19389318-19389543 [-]
Reference genome Brapa_1.0
Source SRR1776796
Length 23
Mature sequence(if miRNA) 204 - GCGGGACGAUCGCUCGGUCGCUU - 226
Stem-loop(if miRNA) --    GA  -A             U                 GA  -A                              GA  -A                              G
  GCGG  CG  UCGCUCGGUCGCU ACGUGGCGACCGAGCGG  CG  UCGCUCGGUCGCUACGUAGCGACCGAGCGG  CG  UCGCUCGGUCGCUACGUAGCGACCGAGCGG A
  ||||  ||  ||||||||||||| |||||||||||||||||  ||  ||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||| C
  CGCU  GC  GGCGAGCCAGCGA UGCAUCGCUGGCUCGCU  GC  GGCGAGCCAGCGAUGCAUCGCUGGCUCGCU  GC  GGCGAGCCAGCGAUGCAUCGCUGGCUCGCU G
CU    -A  AG             -                 -A  AG                              -A  AG                              A
Stem-loop sequence GCGGGACGAUCGCUCGGUCGCUUACGUGGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCGGGACGAUCGCUCGGUCGCUACGUAGCGACCGAGCGGGACGAUCGCUC