| ncRNA ID | novel_bra_miR449 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA1:6907109-6907294 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592478 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUAUGGAGUGGGGUUGGAGAUGCC - 24 |
| Stem-loop(if miRNA) |
-- U G CAU CAUCUCCAACCCCACUCCAUAUUUUACUCCAAAAUUAAGAAAAUGAAGUGGAAAAUGGAG GAUGAACAAAAAAUAAAAG AUUACUC U |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| GUAGAGGUUGGGGUGAGGUAUAAAAUGAGGUUUUAAUUCUUUUACUUCACCUUUUACCUC CUACUUGUUUUUUAUUUUC UAAUGAG U CC C G AAA |
| Stem-loop sequence | CAUCUCCAACCCCACUCCAUAUUUUACUCCAAAAUUAAGAAAAUGAAGUGGAAAAUGGAGUGAUGAACAAAAAAUAAAAGGAUUACUCCAUUUAAAGAGUAAUGCUUUUAUUUUUUGUUCAUCCCUCCAUUUUCCACUUCAUUUUCUUAAUUUUGGAGUAAAAUAUGGAGUGGGGUUGGAGAUGCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018653025.1 |
|
1.5 | PREDICTED: Brassica rapa uncharacterized LOC108869048 (LOC108869048), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_009120896.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103844114 (LOC103844114), mRNA | uncharacterized LOC103844114(LOC103844114) | coding protein | psRNATarget |