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BaseInfo

ncRNA ID novel_bra_miR445
Species Brassica rapa
Class miRNA
Genome position ChrA1:2171151-2171329 [-]
Reference genome Brapa_1.0
Source SRR1161445;SRR1776880;SRR1776889
Length 24
Mature sequence(if miRNA) 156 - AUAUGUUUUAAGGGCACACUUAUC - 179
Stem-loop(if miRNA) --            GG    C         GC A   A               -----U                          ------   G
  AUAUGUUUUAAG  CACA UUAUCAUAA  C AAA UCAGAUAAUUAAUUG      AAACUAUGCAUUGUUUAUAAUUAAAG      ACA U
  ||||||||||||  |||| |||||||||  | ||| |||||||||||||||      ||||||||||||||||||||||||||      |||
  UAUACGAAAUUC  GUGU AAUAGUAUU  G UUU AGUCUAUUGAUUAAC      UUUGAUACGUAACAAAUAUUGAUUUU      UGU G
GU            GG    U         AA C   A               UGAUAU                          ACCUUA   A
Stem-loop sequence AUAUGUUUUAAGGGCACACUUAUCAUAAGCCAAAAAUCAGAUAAUUAAUUGUAAACUAUGCAUUGUUUAUAAUUAAAGACAGUGAUGUAUUCCAUUUUAGUUAUAAACAAUGCAUAGUUUUAUAGUCAAUUAGUUAUCUGAAUUUCGAAUUAUGAUAAUUGUGGGCUUAAAGCAUAUUG