ncRNA ID | novel_bra_miR445 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:2171151-2171329 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1161445;SRR1776880;SRR1776889 |
Length | 24 |
Mature sequence(if miRNA) | 156 - AUAUGUUUUAAGGGCACACUUAUC - 179 |
Stem-loop(if miRNA) |
--            GG    C         GC A   A               -----U                          ------   G   AUAUGUUUUAAG  CACA UUAUCAUAA  C AAA UCAGAUAAUUAAUUG      AAACUAUGCAUUGUUUAUAAUUAAAG      ACA U   ||||||||||||  |||| |||||||||  | ||| |||||||||||||||      ||||||||||||||||||||||||||      |||   UAUACGAAAUUC  GUGU AAUAGUAUU  G UUU AGUCUAUUGAUUAAC      UUUGAUACGUAACAAAUAUUGAUUUU      UGU G GU            GG    U         AA C   A               UGAUAU                          ACCUUA   A |
Stem-loop sequence | AUAUGUUUUAAGGGCACACUUAUCAUAAGCCAAAAAUCAGAUAAUUAAUUGUAAACUAUGCAUUGUUUAUAAUUAAAGACAGUGAUGUAUUCCAUUUUAGUUAUAAACAAUGCAUAGUUUUAUAGUCAAUUAGUUAUCUGAAUUUCGAAUUAUGAUAAUUGUGGGCUUAAAGCAUAUUG |