ncRNA ID | novel_bra_miR445 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:2171151-2171329 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1161445;SRR1776880;SRR1776889 |
Length | 24 |
Mature sequence(if miRNA) | 156 - AUAUGUUUUAAGGGCACACUUAUC - 179 |
Stem-loop(if miRNA) |
-- GG C GC A A -----U ------ G AUAUGUUUUAAG CACA UUAUCAUAA C AAA UCAGAUAAUUAAUUG AAACUAUGCAUUGUUUAUAAUUAAAG ACA U |||||||||||| |||| ||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||| ||| UAUACGAAAUUC GUGU AAUAGUAUU G UUU AGUCUAUUGAUUAAC UUUGAUACGUAACAAAUAUUGAUUUU UGU G GU GG U AA C A UGAUAU ACCUUA A |
Stem-loop sequence | AUAUGUUUUAAGGGCACACUUAUCAUAAGCCAAAAAUCAGAUAAUUAAUUGUAAACUAUGCAUUGUUUAUAAUUAAAGACAGUGAUGUAUUCCAUUUUAGUUAUAAACAAUGCAUAGUUUUAUAGUCAAUUAGUUAUCUGAAUUUCGAAUUAUGAUAAUUGUGGGCUUAAAGCAUAUUG |