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BaseInfo

ncRNA ID	ath-miRf10755-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGCAGCUGCAGCAUCAUCAA - NA
Stem-loop(if miRNA)	C    A    A C  C                U  UAC  A      --------------       AUC AGC ACUG UUGC G UG AGCAUCAUCAAGAUUC CA   AU CAUCAA              AAAUCUA   A ||| |||| |||| | || |||||||||||||||| ||   || ||||||              ||||||| UCG UGAC AGCG C AC UCGUAGUAGUUCUAAG GU   UA GUAGUU              UUUGGGU   U    A    A    A A  C                U  --U  -      CAUAAGCACAUUUA       AAA
Stem-loop sequence	AGCCACUGAUUGCAGCUGCAGCAUCAUCAAGAUUCUCAUACAUACAUCAAAAAUCUAAUCAUAAAUGGGUUUAUUUACACGAAUACUUGAUGAUUUGUGAAUCUUGAUGAUGCUCCAACAGCGAACAGUAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JA894829.1	ncRNA:20   AACUACUACGACGUCGACGU   1   |||||||||||||||||||| targets:104   UUGAUGAUGCUGCAGCUGCA   123 Target Full Sequence	0.0	Sequence 146 from Patent WO2011067745	NA	coding protein	psRNATarget
AY219089.1	ncRNA:20   AACUACUACGACGUCGACGU   1   ||||||||||||||||||*| targets:1551   UUGAUGAUGCUGCAGCUGAA   1570 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g15800/F19G14.20) mRNA, complete cds	NA	coding protein	psRNATarget
BT010458.1	ncRNA:20   AACUACUACGACGUCGACGU   1   *||||||||||||||||*|* targets:1478   AUGAUGAUGCUGCAGCUACU   1497 Target Full Sequence	2.5	Arabidopsis thaliana unknown protein (At2g19710) mRNA, complete cds	NA	coding protein	psRNATarget
AK229767.1	ncRNA:20   AACUACUACGACGUCGACGU   1   *||||||||||||||||*|* targets:1728   AUGAUGAUGCUGCAGCUACU   1747 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-64-L15	NA	coding protein	psRNATarget
BX819674.1	ncRNA:20   AACUACUACGACGUCGACGU   1   *||||||||||||||||*|* targets:1745   AUGAUGAUGCUGCAGCUACU   1764 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_127529.3	ncRNA:20   AACUACUACGACGUCGACGU   1   *||||||||||||||||*|* targets:1744   AUGAUGAUGCUGCAGCUACU   1763 Target Full Sequence	2.5	Arabidopsis thaliana Regulator of Vps4 activity in the MVB pathway protein mRNA	Regulator of Vps4 activity in the MVB pathway protein(AT2G19710)	coding protein	psRNATarget
BT010584.1	ncRNA:20   AACUACUACGACGUCGACGU   1   **|=*||||||||||||||| targets:323   AAGGCGAUGCUGCAGCUGCA   342 Target Full Sequence	3.0	Arabidopsis thaliana At1g62000 gene, complete cds	NA	coding protein	psRNATarget
BT020616.1	ncRNA:20   AACUACUACGACGUCGACGU   1   **|=*||||||||||||||| targets:360   AAGGCGAUGCUGCAGCUGCA   379 Target Full Sequence	3.0	Arabidopsis thaliana At1g62080 gene, complete cds	NA	coding protein	psRNATarget
BX818432.1	ncRNA:20   AACUACUACGACGUCGACGU   1   **|=*||||||||||||||| targets:315   AAGGCGAUGCUGCAGCUGCA   334 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget