ncRNA ID | novel_bra_miR433 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:13231337-13231487 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592478;SRR1776796;SRR1776877;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGGAUUUUUAGUUGAGGGUUUU - 24 |
Stem-loop(if miRNA) |
--                   UAUA    --           UAGUU                 A       UAAA   AACUCUCAACUAAAAAUCC    AAAU  ACCCUCAACUU     UCGUUAACAUAUGUUAC CUCCGUC    A   |||||||||||||||||||    ||||  |||||||||||     ||||||||||||||||| |||||||    A   UUGGGAGUUGAUUUUUAGG    UUUA  UGGGAGUUGAA     GGCAAUUGUAUACAGUG GAGGCAG    A UU                   UCAC    UU           UAUUU                 G       UGCC |
Stem-loop sequence | AACUCUCAACUAAAAAUCCUAUAAAAUACCCUCAACUUUAGUUUCGUUAACAUAUGUUACACUCCGUCUAAAAAACCGUGACGGAGGGUGACAUAUGUUAACGGUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU |