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BaseInfo

ncRNA ID	novel_bra_miR428
Species	Brassica rapa
Class	miRNA
Genome position	ChrA7:6125484-6125668 [-]
Reference genome	Brapa_1.0
Source	SRR1125021;SRR1485262
Length	23
Mature sequence(if miRNA)	163 - UAGUCCAGAGGAUAACAUUCUUA - 185
Stem-loop(if miRNA)	--                                          CC                                             U   UAGUCCAGAGGAUAACAUUCUUAACUCUUCAAGUAUAUGUUU  UCUCGGACUUAAUGCAAAGAAAUUCAAUGCCAUCUUUACUCAUAU G   ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| A   AUCAGGUCUCCUAUUGUAAGAAUUGAGAAGUUCAUAUACAAA  AGAGCCUGAAUUACGUUUCUUUAAGUUACGGUAGAAAUGAGUAUA G AU                                          AA                                             A
Stem-loop sequence	UAGUCCAGAGGAUAACAUUCUUAACUCUUCAAGUAUAUGUUUCCUCUCGGACUUAAUGCAAAGAAAUUCAAUGCCAUCUUUACUCAUAUUGAGAAUAUGAGUAAAGAUGGCAUUGAAUUUCUUUGCAUUAAGUCCGAGAAAAAACAUAUACUUGAAGAGUUAAGAAUGUUAUCCUCUGGACUAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009124503.2	ncRNA:23   AUU-CUUACAAUAGGAGACCUGAU   1   *||-|||||**||||||||||||= targets:1115   AAACGAAUGGAAUCCUCUGGACUG   1138 Target Full Sequence	3.0	PREDICTED: Brassica rapa pentatricopeptide repeat-containing protein At5g02830, chloroplastic (LOC103847423), mRNA	pentatricopeptide repeat-containing protein At5g02830, chloroplastic(LOC103847423)	coding protein	psRNATarget