ncRNA ID | novel_bra_miR426 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:22535326-22535473 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592478 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUAGCGGAAUAUAAGAAAU - 21 |
Stem-loop(if miRNA) |
--U              A        A      CG     C        A         A       UUA   G    UUUAGCGGAAUAUA GAAAUUGU UCUUAA  UUUAA UAAAAAAG UAAGAAUCG UUCUUAA   AUC G    |||||||||||||| |||||||| ||||||  ||||| |||||||| ||||||||| |||||||   ||| C    GAAUCGCCUUAUAU CUUUGACA AGAAUU  AAAUU AUUUUUUC AUUCUUAGC AAGAAUU   UAG U UAC              G        A      AA     A        A         C       -UA   A |
Stem-loop sequence | UUUUAGCGGAAUAUAAGAAAUUGUAUCUUAACGUUUAACUAAAAAAGAUAAGAAUCGAUUCUUAAUUAAUCGGCUAGAUAUUUAAGAACCGAUUCUUAACUUUUUUAAUUAAAAAUUAAGAAACAGUUUCGUAUAUUCCGCUAAGCAU |