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BaseInfo

ncRNA ID novel_bra_miR424
Species Brassica rapa
Class miRNA
Genome position ChrA6:15334529-15334578 [+]
Reference genome Brapa_1.0
Source SRR1592478
Length 24
Mature sequence(if miRNA) 1 - UCGGAAACUCGCUAGGCUGCGGCU - 24
Stem-loop(if miRNA) --   GA         G   G   C
  UCG  AACUCGCUA GCU CGG U
  |||  ||||||||| ||| ||| G
  GGC  UUGAGCGAU CGG GCC A
AA   AG         G   -   C
Stem-loop sequence UCGGAAACUCGCUAGGCUGCGGCUGACCCGGGCGUAGCGAGUUGACGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009129376.2
ncRNA:24   UCGGCGUCGGAUCGCUCAAAGGCU   1
  *|*||*|||||||||||||||||=
targets:185   CGACGGAGCCUAGCGAGUUUCCGG   208

2.0 PREDICTED: Brassica rapa zinc finger protein 6-like (LOC103852473), mRNA zinc finger protein 6-like(LOC103852473) coding protein psRNATarget