ncRNA ID | novel_bra_miR421 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:1046649-1046835 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592478 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUCGUGGACUGUCACGUGUCAGU - 24 |
Stem-loop(if miRNA) |
--CA        UG   UG        --  A     -     UUUUUUUUAUU UG C        --U       AC UU   UCAUUA   A          AUACGUGG  GUC  CGAUUGGU  GU UUUUU UAAUU           C  A AAAAAAAA   UUAAGCA  U  CAA      AUG UGCUCU     ||||||||  |||  ||||||||  || ||||| |||||           |  | ||||||||   |||||||  |  |||      ||| |||||U     UGUGCACU  CAG  GCUAACCA  CA AAAAA AUUAA           G  U UUUUUUUU   AAUUUGU  G  GUU      UAC ACGAGA UGAC        GU   GU        AG  A     U     -UCUCUUUUUU GU U        UUU       -- GG   ------   C      |
Stem-loop sequence | CAAUACGUGGUGGUCUGCGAUUGGUGUAUUUUUUAAUUUUUUUUUUAUUCUGACAAAAAAAAUUUAAGCAACUUUCAAUCAUUAAUGAUGCUCUUAGAGCACCAUUUGGGGUGUUUAAUUUUUUUUUUUUUUGGUUUUUUCUCUAAUUAUAAAAAAACGAACCAAUCGUGGACUGUCACGUGUCAGU |