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BaseInfo

ncRNA ID novel_bra_miR413
Species Brassica rapa
Class miRNA
Genome position ChrA3:15713478-15713644 [+]
Reference genome Brapa_1.0
Source SRR1592478
Length 24
Mature sequence(if miRNA) 1 - AUUUCGGUUUAGAUCGGGUUCGGA - 24
Stem-loop(if miRNA) --AUU     U  G   -        AUC     A        --CAA  AAAAA UUAACGAAACCACUAUAGAGAACAUGAUUCUGA
     UCGGU UA AUC GGGUUCGG   CCAUU UCUAGAUA     GG     G                                 A
     ||||| || ||| ||||||||   ||||| ||||||||     ||     |
     AGUUA AU UAG CCUAGGUC   GGUAG GGAUCUAU     AU     C                                 U
UAUAU     C  G   A        ---     A        CAUUC  ----- UAAUGAGUACAUUACACUAGAAGAGAACAUUUU
Stem-loop sequence AUUUCGGUUUAGAUCGGGUUCGGAUCCCAUUAUCUAGAUACAAGGAAAAAGUUAACGAAACCACUAUAGAGAACAUGAUUCUGAAUUUUUACAAGAGAAGAUCACAUUACAUGAGUAAUCUACUUACUAUCUAGGAGAUGGCUGGAUCCAGAUGUACAUUGAUAUAU