ncRNA ID | novel_bra_miR413 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:15713478-15713644 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592478 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUCGGUUUAGAUCGGGUUCGGA - 24 |
Stem-loop(if miRNA) |
--AUU     U  G   -        AUC     A        --CAA  AAAAA UUAACGAAACCACUAUAGAGAACAUGAUUCUGA      UCGGU UA AUC GGGUUCGG   CCAUU UCUAGAUA     GG     G                                 A      ||||| || ||| ||||||||   ||||| ||||||||     ||     |      AGUUA AU UAG CCUAGGUC   GGUAG GGAUCUAU     AU     C                                 U UAUAU     C  G   A        ---     A        CAUUC  ----- UAAUGAGUACAUUACACUAGAAGAGAACAUUUU |
Stem-loop sequence | AUUUCGGUUUAGAUCGGGUUCGGAUCCCAUUAUCUAGAUACAAGGAAAAAGUUAACGAAACCACUAUAGAGAACAUGAUUCUGAAUUUUUACAAGAGAAGAUCACAUUACAUGAGUAAUCUACUUACUAUCUAGGAGAUGGCUGGAUCCAGAUGUACAUUGAUAUAU |