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BaseInfo

ncRNA ID	novel_bra_miR412
Species	Brassica rapa
Class	miRNA
Genome position	ChrA2:11627986-11628094 [+]
Reference genome	Brapa_1.0
Source	SRR1592478
Length	24
Mature sequence(if miRNA)	86 - GAGUGGGAAAUGGAGUAGGGUUGG - 109
Stem-loop(if miRNA)	--     A       A         AU    ---  AUUUACUCCAUAAAUGGAGU   AACCC ACUCCAU UCUCACUCU  AAUG   AA                    A   ||||| ||||||| |||||||||  ||||   ||                    G   UUGGG UGAGGUA AGGGUGAGG  AAUA   CA                    U GG     A       A         -G    UCU  CUACUUGUUUGUUUUUUAUU
Stem-loop sequence	AACCCAACUCCAUAUCUCACUCUAUAAUGAAAUUUACUCCAUAAAUGGAGUAGUUUAUUUUUUGUUUGUUCAUCACUCUAUAAGGGAGUGGGAAAUGGAGUAGGGUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009141133.2	ncRNA:24   GGUUGGGAUGAGGUAAAGGGUGAG   1   |=|*||||*||||||*|||||||| targets:122   CUAUCCCUUCUCCAUCUCCCACUC   145 Target Full Sequence	2.5	PREDICTED: Brassica rapa pentatricopeptide repeat-containing protein At3g53700, chloroplastic (LOC103863383), mRNA	pentatricopeptide repeat-containing protein At3g53700, chloroplastic(LOC103863383)	coding protein	psRNATarget