ncRNA ID | novel_bra_miR406 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:3447526-3447612 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1161445 |
Length | 21 |
Mature sequence(if miRNA) | 67 - UCUCGUUCUCUCGUUUCAGCU - 87 |
Stem-loop(if miRNA) |
-- G U C AA -UAUU - G UCUC UUC CU GUUUCAGCU UGUG GUUUCA UCA U |||| ||| || ||||||||| |||| |||||| ||| U AGAG AAG GA CGAAGUCGA ACAU CAAAGU GGU A AG A U U -- UUGUU U A |
Stem-loop sequence | UCUCGUUCUCUCGUUUCAGCUAAUGUGUAUUGUUUCAUCAGUUAAUGGUUGAAACUUGUUUACAAGCUGAAGCUAGUGAAAGAGAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009152717.2 |
|
3.0 | PREDICTED: Brassica rapa metal-nicotianamine transporter YSL2 (LOC103874307), mRNA | metal-nicotianamine transporter YSL2(LOC103874307) | coding protein | psRNATarget |