ncRNA ID | novel_bra_miR398 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:27152572-27152660 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592477 |
Length | 22 |
Mature sequence(if miRNA) | 68 - CGUGGGCGGGUCGGGGCGUUAU - 89 |
Stem-loop(if miRNA) |
--    GA      -   AG    --      --      G G   AG   AACG  CCGACC GUC  ACGG  GAUGGG  GCCCAC G CCG  A   ||||  |||||| |||  ||||  ||||||  |||||| | |||   UUGC  GGCUGG CGG  UGCC  UUACCC  UGGGUG C GGC  G UA    GG      G   -G    GA      GG      - G   GA |
Stem-loop sequence | AACGGACCGACCGUCAGACGGGAUGGGGCCCACGGGCCGAGAGAGCGGGCGUGGGUGGCCCAUUAGCCGUGGGCGGGUCGGGGCGUUAU |