ncRNA ID | novel_bra_miR397 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:33697050-33697110 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592477 |
Length | 24 |
Mature sequence(if miRNA) | 38 - AAAAAAGCUAAGAACCGGUUUUUA - 61 |
Stem-loop(if miRNA) |
--              C            C   AAAAAAGCUAAGAA CGGUUUUUAAGU U   |||||||||||||| |||||||||||| C   UUUUUUUGAUUUUU GUCAAAAAUUUA U UU              A            U |
Stem-loop sequence | AAAAAAGCUAAGAACCGGUUUUUAAGUCUCUUAUUUAAAAACUGAUUUUUAGUUUUUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009131757.2 |
|
1.5 | PREDICTED: Brassica rapa uncharacterized LOC103854791 (LOC103854791), mRNA | uncharacterized LOC103854791(LOC103854791) | coding protein | psRNATarget |