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BaseInfo

ncRNA ID ath-miRf10751-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUUGUGGAGAGGAAGCAAGA - NA
Stem-loop(if miRNA) U                GA          G          G        -------------AUAU  GGCCCUUAAAA
 UGUAAUUUCUUGUGGA  GGAAGCAAGA GAUGUGCUUG UUGUGGAA                 AG           U
 ||||||||||||||||  |||||||||| |||||||||| ||||||||                 ||
 ACAUUAAAGAACACCU  CCUUCGUUCU CUACACGAAU AACACCUU                 UU           A
A                --          A          G        AAAAACAAUACACUCAC  AUGCUACUUAU
Stem-loop sequence UUGUAAUUUCUUGUGGAGAGGAAGCAAGAGGAUGUGCUUGGUUGUGGAAAUAUAGGGCCCUUAAAAUAUAUUCAUCGUAUUCACUCACAUAACAAAAAUUCCACAAGUAAGCACAUCAUCUUGCUUCCUCCACAAGAAAUUACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001338546.1
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  *||||*||||||||||||||
targets:1682   CCUUGAUUCCUCUCCACAAG   1701

1.0 Arabidopsis thaliana Protein phosphatase 2A regulatory B subunit family protein mRNA Protein phosphatase 2A regulatory B subunit family protein(AT3G21650) coding protein psRNATarget
NM_113060.5
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  *||||*||||||||||||||
targets:1623   CCUUGAUUCCUCUCCACAAG   1642

1.0 Arabidopsis thaliana Protein phosphatase 2A regulatory B subunit family protein mRNA Protein phosphatase 2A regulatory B subunit family protein(AT3G21650) coding protein psRNATarget
BX823131.1
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  *||||*||||||||||||||
targets:1566   CCUUGAUUCCUCUCCACAAG   1585

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AK227037.1
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  *||||*||||||||||||||
targets:1333   CCUUGAUUCCUCUCCACAAG   1352

1.0 Arabidopsis thaliana mRNA for putative B' regulatory subunit of PP2A, complete cds, clone: RAFL09-56-F08 NA coding protein psRNATarget
NM_113507.3
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  |||||*|||||||*||||||
targets:1642   UCUUGAUUCCUCUGCACAAG   1661

2.5 Arabidopsis thaliana serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta (ATB' DELTA), mRNA serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta(ATB' DELTA) coding protein psRNATarget
AF062396.1
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  |||||*|||||||*||||||
targets:1262   UCUUGAUUCCUCUGCACAAG   1281

2.5 Arabidopsis thaliana protein phosphatase 2A regulatory subunit isoform B' delta mRNA, complete cds NA coding protein psRNATarget
AY091037.1
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  |||||*|||||||*||||||
targets:1282   UCUUGAUUCCUCUGCACAAG   1301

2.5 Arabidopsis thaliana putative protein phosphatase 2A regulatory subunit isoform B delta (At3g26030) mRNA, complete cds NA coding protein psRNATarget
AY117349.1
ncRNA:20   AGAACGAAGGAGAGGUGUUC   1
  |||||*|||||||*||||||
targets:854   UCUUGAUUCCUCUGCACAAG   873

2.5 Arabidopsis thaliana putative protein phosphatase 2A regulatory subunit isoform B delta (At3g26030) mRNA, complete cds NA coding protein psRNATarget