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BaseInfo

ncRNA ID	novel_bra_miR390
Species	Brassica rapa
Class	miRNA
Genome position	ChrA8:8319810-8319925 [-]
Reference genome	Brapa_1.0
Source	SRR1592477
Length	21
Mature sequence(if miRNA)	1 - GCUCAAGAAAGCUGUGGGAAA - 21
Stem-loop(if miRNA)	--                 A    -C      --AUUUCCCUU  U      CCAAAAU   UUCCACAGCUUUCUUGA CUUU  UUUUUC           AU UUAGAG       A   ||||||||||||||||| ||||  ||||||           || ||||||       A   AGGGUGUCGAAAGAACU GAAA  AAAAAG           UA AAUCUC       C AA                 C    AA      AUCUCACAAUU  C      UAAAAAU
Stem-loop sequence	UUCCACAGCUUUCUUGAACUUUCUUUUUCAUUUCCCUUAUUUUAGAGCCAAAAUAACUAAAAAUCUCUAACAUUUAACACUCUAGAAAAAAAAAAGCUCAAGAAAGCUGUGGGAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009117868.2	ncRNA:21   AAAGGGUGUCGAAAGAACUCG   1   **|=||||||||||*|||||| targets:1080   CGUUCCACAGCUUUGUUGAGC   1100 Target Full Sequence	2.5	PREDICTED: Brassica rapa TATA-binding protein-associated factor BTAF1 (LOC103841344), mRNA	TATA-binding protein-associated factor BTAF1(LOC103841344)	coding protein	psRNATarget