ncRNA ID | novel_bra_miR386 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:8438542-8438657 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592477 |
Length | 23 |
Mature sequence(if miRNA) | 94 - ACUUAUUCGGAUUGAGAUCGGUU - 116 |
Stem-loop(if miRNA) |
--  A              --U  A     UU               C    U     AU   UC AUUUCGGUUCGGAU   UA UACUA  AAUUCGGAUUGGGAU GGUU GAAUA  U   || ||||||||||||||   || |||||  ||||||||||||||| |||| |||||  C   GG UAGAGUUAGGCUUA   AU AUGAU  UUAGGCUUAGCCUUA CUAA UUUAU  A UU  C              UUC  C     --               A    -     AG |
Stem-loop sequence | UCAAUUUCGGUUCGGAUUUAAUACUAUUAAUUCGGAUUGGGAUCGGUUUGAAUAAUUCAGAUAUUUAAUCAAUUCCGAUUCGGAUUUAGUACUACUUAUUCGGAUUGAGAUCGGUU |