ncRNA ID | novel_bra_miR378 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:15937915-15938076 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1592477 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUGGGCACACUAACAACUAGAU - 24 |
Stem-loop(if miRNA) |
--   U                    A       C     A    CACCAAA   U         --------UAAG      AAGA   AAA GGGCACACUAACAACUAGAU AAAGUAA UUUUU AAAU       GUU UAAAUUGGA            AUGAAC    A   ||| |||||||||||||||||||| ||||||| ||||| ||||       ||| |||||||||            ||||||   UUU CCCGUGUGAUUGUUGAUCUG UUUUAUU AAAAA UUUA       UAA GUUUAACUU            UAUUUG    U AA   C                    A       A     C    ----UAA   U         UAAGAGGUAAUA      AUGA |
Stem-loop sequence | AAAUGGGCACACUAACAACUAGAUAAAAGUAACUUUUUAAAAUCACCAAAGUUUUAAAUUGGAUAAGAUGAACAAGAAUAGUAGUUUAUAUAAUGGAGAAUUUCAAUUUGUAAUAAUAUUUCAAAAAAUUAUUUUAGUCUAGUUGUUAGUGUGCCCCUUUAA |