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BaseInfo

ncRNA ID	novel_bra_miR371
Species	Brassica rapa
Class	miRNA
Genome position	ChrA5:3222230-3222310 [-]
Reference genome	Brapa_1.0
Source	SRR1592477
Length	21
Mature sequence(if miRNA)	1 - GCGUAUGAGGAGCCAUGCAUA - 21
Stem-loop(if miRNA)	--   C       CU         C U UA  C          UGC UGGCUCC  GUAUGCCAU C C  AG UCAUCGAC   ||| |||||||  ||||||||| | |  || |||||||C   ACG ACCGAGG  UAUGCGGUA G G  UC AGUAGUUA AU   U       AG         A U CC  C
Stem-loop sequence	UGCCUGGCUCCCUGUAUGCCAUCCUCUAAGCUCAUCGACCAUUGAUGACCUCCGUGAAUGGCGUAUGAGGAGCCAUGCAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009130863.1	ncRNA:20   UACGUACCGAGGAGUAUGCG   1   *||*||||||=||||||||| targets:1   UUGGAUGGCUUCUCAUACGC   20 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC103853970 (LOC103853970), mRNA	uncharacterized LOC103853970(LOC103853970)	coding protein	psRNATarget
XM_018654677.1	ncRNA:21   AUACGUACCGAGGAGUAUGCG   1   |*|||||*||||||||||*|| targets:1744   UCUGCAUCGCUCCUCAUAAGC   1764 Target Full Sequence	2.5	PREDICTED: Brassica rapa monosaccharide-sensing protein 3 (LOC103841076), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018654676.1	ncRNA:21   AUACGUACCGAGGAGUAUGCG   1   |*|||||*||||||||||*|| targets:1817   UCUGCAUCGCUCCUCAUAAGC   1837 Target Full Sequence	2.5	PREDICTED: Brassica rapa monosaccharide-sensing protein 3 (LOC103841076), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_009117589.2	ncRNA:21   AUACGUACCGAGGAGUAUGCG   1   |*|||||*||||||||||*|| targets:2069   UCUGCAUCGCUCCUCAUAAGC   2089 Target Full Sequence	2.5	PREDICTED: Brassica rapa monosaccharide-sensing protein 3 (LOC103841076), transcript variant X1, mRNA	monosaccharide-sensing protein 3(LOC103841076)	coding protein	psRNATarget