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BaseInfo

ncRNA ID ath-miRf10748-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AUCAUGAAGGAGAGAUCUUU - NA
Stem-loop(if miRNA) UC   G      -                UCA  AAGU   GGA
  UCA AAGAUC AUGAAGGAGAGAUCUU   GA    UUG   A
  ||| |||||| ||||||||||||||||   ||    |||
  GGU UUUUAG UACUUCUUUUCUAGAA   CU    GAC   U
-A   G      A                ---  AAUU   GUA
Stem-loop sequence UCUCAGAAGAUCAUGAAGGAGAGAUCUUUCAGAAAGUUUGGGAAUAUGCAGUUAAUCAAGAUCUUUUCUUCAUAGAUUUUGUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_105216.5
ncRNA:20   UUUCUAGAGAGGAAGUACUA   1
  ||||=|||||||||=|||||
targets:286   AAAGGUCUCUCCUUUAUGAU   305

2.5 Arabidopsis thaliana antigen receptor-like protein (DUF565) (NPQ7), mRNA antigen receptor-like protein (DUF565)(NPQ7) coding protein psRNATarget
BX817510.1
ncRNA:20   UUUCUAGAGAGGAAGUACUA   1
  ||||=|||||||||=|||||
targets:226   AAAGGUCUCUCCUUUAUGAU   245

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY088215.1
ncRNA:20   UUUCUAGAGAGGAAGUACUA   1
  ||||=|||||||||=|||||
targets:248   AAAGGUCUCUCCUUUAUGAU   267

2.5 Arabidopsis thaliana clone 4326 mRNA, complete sequence NA coding protein psRNATarget
BT025776.1
ncRNA:20   UUUCUAGAGAGGAAGUACUA   1
  ||||=|||||||||=|||||
targets:52   AAAGGUCUCUCCUUUAUGAU   71

2.5 Arabidopsis thaliana At1g65420 mRNA, complete cds NA coding protein psRNATarget