Search result

BaseInfo

ncRNA ID novel_bra_miR352
Species Brassica rapa
Class miRNA
Genome position ChrA10:9616053-9616127 [-]
Reference genome Brapa_1.0
Source SRR1592477;SRR1485275
Length 23
Mature sequence(if miRNA) 53 - UUAGCGGAAUAUAAGAAUCGGUU - 75
Stem-loop(if miRNA) --                   -G         A    U
  UUAGCGGAAUAUAAGAAUC  GUUUUUAGC UUUU A
  |||||||||||||||||||  ||||||||| |||| G
  AAUUGCCUUAUAUUUUUGG  CAAAAAUUG AAAA U
AG                   GG         -    U
Stem-loop sequence UUAGCGGAAUAUAAGAAUCGGUUUUUAGCAUUUUUAGUUAAAAGUUAAAAACGGGGUUUUUAUAUUCCGUUAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018653796.1
ncRNA:23   UUGGCUAAGAAUAUAAGGCGAUU   1
  ||*=|||||*||||||||||||=
targets:9687   AAAUGAUUCAUAUAUUCCGCUAG   9709

2.0 PREDICTED: Brassica rapa uncharacterized LOC103833252 (LOC103833252), mRNA NA coding protein psRNATarget