| ncRNA ID | novel_bra_miR349 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA3:565967-566176 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1592477 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - AAUGGAGUGGGAAAUGGAGUA - 21 |
| Stem-loop(if miRNA) |
-- A - -----------------G U -ACCC A ACCCC AAUGGAGUGGGAAAUGGAGUAAUGAACAAAAAA UAAAAG AUUACUCCAUUUAUAGAGUAAGA CA CUCCA CACUCCAU UUUU C ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| |||||||| |||| A UUACCUCAUCCUUUACCUCAUUACUUGUUUUUU AUUUUC UAAUGAGGUAAAUAUCUCAUUUU GU GAGGU GUGAGGUA AAAA A UU - C GAAAAUAAAAAACAAGUA - AAACU A GAUAA |
| Stem-loop sequence | AAUGGAGUGGGAAAUGGAGUAAUGAACAAAAAAAUAAAAGAUUACUCCAUUUAUAGAGUAAGAGCAUCUCCAACCCCACUCCAUAUUUUACCCCCAAAAUAGAAAAAAUGGAGUGUCAAAUGGAGUGAUGAACAAAAAAUAAAAGUUUUACUCUAUAAAUGGAGUAAUCCUUUUAUUUUUUGUUCAUUACUCCAUUUCCUACUCCAUUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009123752.2 |
|
3.0 | PREDICTED: Brassica rapa trafficking protein particle complex II-specific subunit 120 homolog (LOC103846756), mRNA | trafficking protein particle complex II-specific subunit 120 homolog(LOC103846756) | coding protein | psRNATarget |