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BaseInfo

ncRNA ID novel_bra_miR346
Species Brassica rapa
Class miRNA
Genome position ChrA3:30784464-30784625 [-]
Reference genome Brapa_1.0
Source SRR1592477
Length 24
Mature sequence(if miRNA) 139 - AAAUGGGCACACUAACAACUAGAU - 162
Stem-loop(if miRNA) --   U                    A       C     A    CACCAAA   U         --------UAAG      AAGA
  AAA GGGCACACUAACAACUAGAU AAAGUAA UUUUU AAAU       GUU UAAAUUGGA            AUGAAC    A
  ||| |||||||||||||||||||| ||||||| ||||| ||||       ||| |||||||||            ||||||
  UUU CCCGUGUGAUUGUUGAUCUG UUUUAUU AAAAA UUUA       UAA GUUUAACUU            UAUUUG    U
AA   C                    A       A     C    ----UAA   U         UAAGAGGUAAUA      AUGA
Stem-loop sequence AAAUGGGCACACUAACAACUAGAUAAAAGUAACUUUUUAAAAUCACCAAAGUUUUAAAUUGGAUAAGAUGAACAAGAAUAGUAGUUUAUAUAAUGGAGAAUUUCAAUUUGUAAUAAUAUUUCAAAAAAUUAUUUUAGUCUAGUUGUUAGUGUGCCCCUUUAA