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BaseInfo

ncRNA ID ath-miRf10746-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GCGGCUGUUGCAGCUGCUGC - NA
Stem-loop(if miRNA)         U              G    
GCGGCUGU GCAGCUGCUGCGGC GCGGC
|||||||| |||||||||||||| ||||G
CGUCGGCG CGUCGACGGCGUCG CGUCG
        U              A    
Stem-loop sequence GCGGCUGUUGCAGCUGCUGCGGCGGCGGCGGCUGCAGCUGCGGCAGCUGCUGCGGCUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK220842.1
ncRNA:20   CGUCGUCGACGUUGUCGGCG   1
  ||||||||||||||||||||
targets:107   GCAGCAGCUGCAACAGCCGC   126

0.0 Arabidopsis thaliana mRNA for FtsH like protease, partial cds, clone: RAFL22-38-C03 NA coding protein psRNATarget
AF360344.1
ncRNA:20   CGUCGUCGACGUUGUCGGCG   1
  ||||||||||||||||||||
targets:2246   GCAGCAGCUGCAACAGCCGC   2265

0.0 Arabidopsis thaliana At2g26140 mRNA sequence NA coding protein psRNATarget
BX820113.1
ncRNA:20   CGUCGUCGACGUUGUCGGCG   1
  ||||||||||||||||||||
targets:2304   GCAGCAGCUGCAACAGCCGC   2323

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
NM_128172.4
ncRNA:20   CGUCGUCGACGUUGUCGGCG   1
  ||||||||||||||||||||
targets:2440   GCAGCAGCUGCAACAGCCGC   2459

0.0 Arabidopsis thaliana FTSH protease 4 (ftsh4), mRNA FTSH protease 4(ftsh4) coding protein psRNATarget
BX826420.1
ncRNA:20   CGUCGUCGACGUUGUCGGCG   1
  *|||||||*||||||||||=
targets:1386   UCAGCAGCAGCAACAGCCGU   1405

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget