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BaseInfo

ncRNA ID	novel_bra_miR335
Species	Brassica rapa
Class	miRNA
Genome position	ChrA7:20883667-20883761 [+]
Reference genome	Brapa_1.0
Source	SRR1161445;SRR1485263
Length	21
Mature sequence(if miRNA)	1 - UUGGCAUUCUGUCCACCUCCU - 21
Stem-loop(if miRNA)	--      U C             U --U       -----U        A   UUGGCA U UGUCCACCUCCUU C   GAAUAUA      UUGUGUAU A   |||||| | ||||||||||||| |   |||||||      ||||||||   AACCGU A ACGGGUGGAGGAG G   UUUGUGU      AACGCAUG G AU      C U             U UGU       UGCAUC        U
Stem-loop sequence	UUGGCAUUCUGUCCACCUCCUUUCUGAAUAUAUUUGUGUAUAAGUGUACGCAACUACGUUGUGUUUUGUGUGAGGAGGUGGGCAUACUGCCAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009115529.2	ncRNA:21   UCCUCCACCUGUCUUACGGUU   1   |||||||*||||||||||||| targets:1295   AGGAGGUUGACAGAAUGCCAA   1315 Target Full Sequence	1.0	PREDICTED: Brassica rapa F-box only protein 6 (LOC103839047), mRNA	F-box only protein 6(LOC103839047)	coding protein	psRNATarget
XM_018653132.1	ncRNA:21   UCCUCCACCUGUCUUACGGUU   1   |||||||*||||||||||||| targets:1343   AGGAGGUUGACAGAAUGCCAA   1363 Target Full Sequence	1.0	PREDICTED: Brassica rapa F-box only protein 6 (LOC103829071), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_009104739.2	ncRNA:21   UCCUCCACCUGUCUUACGGUU   1   |||||||*||||||||||||| targets:1343   AGGAGGUUGACAGAAUGCCAA   1363 Target Full Sequence	1.0	PREDICTED: Brassica rapa F-box only protein 6 (LOC103829071), transcript variant X1, mRNA	F-box only protein 6(LOC103829071)	coding protein	psRNATarget