ncRNA ID | novel_bra_miR331 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:24206393-24206448 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1592476 |
Length | 24 |
Mature sequence(if miRNA) | 33 - GAAGGAUGGUUGCUAGAUCUAGGG - 56 |
Stem-loop(if miRNA) |
--   GG     UG    -    A    U   GAA  AUGGU  CUAG AUCU GGGU U   |||  |||||  |||| |||| ||||   CUU  UAUUA  GGUU UGGA CUUA C UC   AA     GA    G    -    U |
Stem-loop sequence | GAAGGAUGGUUGCUAGAUCUAGGGUUUCUAUUCAGGUGUUGGAGAUUAUAAUUCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009127407.1 |
|
3.0 | PREDICTED: Brassica rapa TATA-box-binding protein 1-like (LOC103850628), mRNA | TATA-box-binding protein 1-like(LOC103850628) | coding protein | psRNATarget |